AX-89812308, AX-89812308 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812308
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817572
TypeSNP
SNP AllelesA/G
Probe 1AX-89812308.AX-89812308: CGTGTACATGAGTAGGTAGTCATACAAAAC
5' Flanking SequenceTTTGGGCACATGTACTCATCCATCAGTATGTTTTG
3' Flanking SequenceGGCTTTATGTCACAGTGAATGATCTGTGTATCACA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812308 ID=AX-89812308; Name=AX-89812308; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTTGGGCACATGTACTCATCCATCAGTATGTTTTGRGGCTTTATGTCACA
GTGAATGATCTGTGTATCACA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:18711133..18711203+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:18709067..18709137- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-3 chromosome Fvb1-3:15726970..15727040+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:15706760..15706830+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:13681003..13681046- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:15704739..15704809- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:16845117..16845187- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:16729793..16729793. Fragaria vesca Whole Genome v1.1 Assembly & Annotation