AX-89812314, AX-89812314 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812314
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817862
TypeSNP
SNP AllelesT/G
Probe 1AX-89812314.AX-89812314: GTGGAAGTCAGAGAGGAAGTGGCAAGTTAG
5' Flanking SequenceCCCTTCACCTTCAGTCTCTCCTTCACCGTTCAATC
3' Flanking SequenceGGGTTTCAATTTACTGAGGAAACGTTACCCCTCTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb1chromosomeFvb1:12634888..12634958 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
LG1chromosomeLG1:17299792..17299792 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Sequence
>AX-89812314 ID=AX-89812314; Name=AX-89812314; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCCTTCACCTTCAGTCTCTCCTTCACCGTTCAATCKGGGTTTCAATTTAC
TGAGGAAACGTTACCCCTCTT