AX-89869318, AX-89869318 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869318
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817902
TypeSNP
SNP AllelesA/G
Probe 1AX-89869318.AX-89869318: TAGCTAACGTAGTCGTCGCGACGACAACGA
5' Flanking SequenceCTCCTGTCTCTCCCTCTAGCCACTTTTCTGCTTCC
3' Flanking SequenceAGCAACAGCAGCGCTGCTGATGCAATCGATTCCAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869318 ID=AX-89869318; Name=AX-89869318; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTCCTGTCTCTCCCTCTAGCCACTTTTCTGCTTCCRAGCAACAGCAGCGC
TGCTGATGCAATCGATTCCAC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:16028245..16028315+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:14838759..14838828- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:14621966..14622036+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:17264531..17264601+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:17969832..17969902+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:11892097..11892167+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:16406584..16406653- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:17438488..17438488. Fragaria vesca Whole Genome v1.1 Assembly & Annotation