AX-89869323, AX-89869323 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869323
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88818077
TypeSNP
SNP AllelesA/C
Probe 1AX-89869323.AX-89869323: CTGCTTTAGCCTCTACGTCCGCAGCCGCAA
5' Flanking SequenceTCTGATACCGTCGACAAAGCCTGCATCTCCGATCC
3' Flanking SequenceAACGCCGACGCCTGCATCTCCGATTTCGTCGACGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869323 ID=AX-89869323; Name=AX-89869323; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCTGATACCGTCGACAAAGCCTGCATCTCCGATCCMAACGCCGACGCCTG
CATCTCCGATTTCGTCGACGA
Alignments
Feature NameTypeLocationAnalysis
Fvb4 chromosome Fvb4:11201454..11201524+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:16430614..16430684+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:4336321..4336373- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5-1 chromosome Fvb5-1:15381859..15381909+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:18359633..18359695- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:12995486..12995583- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:19016006..19016056- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:21008379..21008449- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:24804214..24804266- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:17840857..17840857. Fragaria vesca Whole Genome v1.1 Assembly & Annotation