AX-89812358, AX-89812358 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812358
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88818741
TypeSNP
SNP AllelesT/G
Probe 1AX-89812358.AX-89812358: CATCTTGAGGACCTTATTTCTCCAAAACTA
5' Flanking SequenceCTTAGGTAGAACTCCTGGAATAAAGAGGTTTTGAT
3' Flanking SequenceGGCAACTTCTCCACTTGTATCCTCCCTATAACCAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812358 ID=AX-89812358; Name=AX-89812358; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTTAGGTAGAACTCCTGGAATAAAGAGGTTTTGATKGGCAACTTCTCCAC
TTGTATCCTCCCTATAACCAG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:2156341..2156411- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:2166322..2166392- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:39008159..39008229+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:33950154..33950224+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:41068292..41068362- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:19344712..19344712. Fragaria vesca Whole Genome v1.1 Assembly & Annotation