AX-89812360, AX-89812360 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812360
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88818777
TypeSNP
SNP AllelesT/G
Probe 1AX-89812360.AX-89812360: AGTAGGTAGAGGGAAAAGTCGGTCTTACGG
5' Flanking SequenceAAATCTCATCCATCTCCCTTTTCAGCCAGAATGCC
3' Flanking SequenceTTGGAAGTGGCCTTTCTTCTCCGGTCACCTCAAAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812360 ID=AX-89812360; Name=AX-89812360; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AAATCTCATCCATCTCCCTTTTCAGCCAGAATGCCKTTGGAAGTGGCCTT
TCTTCTCCGGTCACCTCAAAC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:2077562..2077632- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:39085367..39085437+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:39047644..39047714+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:39041879..39041951+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:34006516..34006586+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:40995460..40995530- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:41034214..41034284- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:19423491..19423491. Fragaria vesca Whole Genome v1.1 Assembly & Annotation