AX-89869369, AX-89869369 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869369
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88818819
TypeSNP
SNP AllelesA/G
Probe 1AX-89869369.AX-89869369: GTTTGACAACTTCGTATTTCGATAACCCAC
5' Flanking SequenceGAGTTTTTGCTAAGGCAGATGAACTTCTAAGTACC
3' Flanking SequenceCACCCAATAGCTTTATGCTTCAACAGTTTGAGAAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869369 ID=AX-89869369; Name=AX-89869369; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GAGTTTTTGCTAAGGCAGATGAACTTCTAAGTACCRCACCCAATAGCTTT
ATGCTTCAACAGTTTGAGAAC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:2013304..2013374- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:2031319..2031389- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:2000410..2000760- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:39128281..39128351+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:25433377..25433447+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:25403355..25403425+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:33044390..33044740+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:40942326..40942396- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:34061116..34061186- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:33006710..33006780- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:19487749..19487749. Fragaria vesca Whole Genome v1.1 Assembly & Annotation