AX-89869386, AX-89869386 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869386
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88819353
TypeSNP
SNP AllelesA/G
Probe 1AX-89869386.AX-89869386: ACACTTTCTAAACCTGAGGTTCCGTTAGGG
5' Flanking SequenceGTTTCTTTAGACTGGGAAACTTGGGCAAGAAACAC
3' Flanking SequenceGGGATTGCCTTGGAGTCCAAATCTTTCACATACGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869386 ID=AX-89869386; Name=AX-89869386; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTTTCTTTAGACTGGGAAACTTGGGCAAGAAACACRGGGATTGCCTTGGA
GTCCAAATCTTTCACATACGA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:23349023..23349093+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:19630981..19631051- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5-3 chromosome Fvb5-3:9080999..9081069+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:22565546..22565616+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:26375209..26375279+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:28411756..28411826+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:18346535..18346605- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:21494936..21495006- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:20910504..20910504. Fragaria vesca Whole Genome v1.1 Assembly & Annotation