AX-89812809, AX-89812809 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812809
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820739
TypeSNP
SNP AllelesT/G
Probe 1AX-89812809.AX-89812809: GTACACCTACGACGCATACGACCTTCTAGG
5' Flanking SequenceGGGTTCATGTGGATGCTGCGTATGCTGGAAGATCC
3' Flanking SequenceGCATTTGTCCAGAGTTTCAGCATTACATCGATGGC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812809 ID=AX-89812809; Name=AX-89812809; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGGTTCATGTGGATGCTGCGTATGCTGGAAGATCCKGCATTTGTCCAGAG
TTTCAGCATTACATCGATGGC
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:13194154..13194224+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:13178504..13178574+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:5447185..5447238- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3-4 chromosome Fvb3-4:24222758..24222811+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:12063339..12063409- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:3072375..3072375. Fragaria vesca Whole Genome v1.1 Assembly & Annotation