AX-89812816, AX-89812816 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812816
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820911
TypeSNP
SNP AllelesA/C
Probe 1AX-89812816.AX-89812816: TAATTAGAGGTTCAAGGACAGTTGGAGAGG
5' Flanking SequenceAACAAATTAATCTCCAAGTTCCTGTCAACCTCTCC
3' Flanking SequenceAAGTCCACTGCTCTCACCACTCTCTCTTATCTACT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812816 ID=AX-89812816; Name=AX-89812816; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AACAAATTAATCTCCAAGTTCCTGTCAACCTCTCCMAAGTCCACTGCTCT
CACCACTCTCTCTTATCTACT
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:13469558..13469628+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:12197956..12198026+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:9471612..9471682+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:11706095..11706165- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:10715366..10715436- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:3347779..3347779. Fragaria vesca Whole Genome v1.1 Assembly & Annotation