AX-89869810, AX-89869810 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869810
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820936
TypeSNP
SNP AllelesA/G
Probe 1AX-89869810.AX-89869810: GTAGAAAGTAGTCTACATACGTACCTATGG
5' Flanking SequenceATTTAAGCCAGCATATATACCTGTTGGCATATCCA
3' Flanking SequenceGGTATCCATGCATACATCTGATGAAAGATGCATAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869810 ID=AX-89869810; Name=AX-89869810; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTTAAGCCAGCATATATACCTGTTGGCATATCCARGGTATCCATGCATA
CATCTGATGAAAGATGCATAG
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:13481400..13481470+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:12209806..12209876+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:9484540..9484610+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:11694233..11694303- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:10703455..10703525- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:3359621..3359621. Fragaria vesca Whole Genome v1.1 Assembly & Annotation