AX-89812840, AX-89812840 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812840
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88821467
TypeSNP
SNP AllelesA/G
Probe 1AX-89812840.AX-89812840: AAACTATTCTCGTAACATGCAATCTTCACA
5' Flanking SequenceAGACCTTTGATAAGAGCATTGTACGTTAGAAGTGT
3' Flanking SequenceGGATTGAAACCTATACTCAACATCTCATCTCGAAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812840 ID=AX-89812840; Name=AX-89812840; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGACCTTTGATAAGAGCATTGTACGTTAGAAGTGTRGGATTGAAACCTAT
ACTCAACATCTCATCTCGAAC
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:8737747..8737817+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:5143088..5143158- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:18110744..18110814- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:18140825..18140895- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:4860019..4860019. Fragaria vesca Whole Genome v1.1 Assembly & Annotation