AX-89812842, AX-89812842 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812842
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88821473
TypeSNP
SNP AllelesA/G
Probe 1AX-89812842.AX-89812842: AAGTTTCAAACCTTCACCTGTTATCATTGG
5' Flanking SequenceTTTATTTCAAAGTTTGGAAGTGGACAATAGTAACC
3' Flanking SequenceACCAGTGGGAACTGGAAGCATTACCTCCTTCCAAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812842 ID=AX-89812842; Name=AX-89812842; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTTATTTCAAAGTTTGGAAGTGGACAATAGTAACCRACCAGTGGGAACTG
GAAGCATTACCTCCTTCCAAG
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:8745387..8745457+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-2 chromosome Fvb2-2:17816837..17816907+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:3648793..3648863+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-4 chromosome Fvb2-4:5118191..5118261- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:18107195..18107265- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:4867659..4867659. Fragaria vesca Whole Genome v1.1 Assembly & Annotation