AX-89869835, AX-89869835 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869835
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88821600
TypeSNP
SNP AllelesA/C
Probe 1AX-89869835.AX-89869835: AATCCATCAAAGAATATAACAAAACAATGA
5' Flanking SequenceAACCCAATTAACGGAGCAAATCGTCGTATGGAACC
3' Flanking SequenceAGTAACAAAACAATATAAGAAACTACCTAAGCCTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869835 ID=AX-89869835; Name=AX-89869835; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AACCCAATTAACGGAGCAAATCGTCGTATGGAACCMAGTAACAAAACAAT
ATAAGAAACTACCTAAGCCTC
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:7680797..7680856+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:9038090..9038160+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:22246654..22246718+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5-1 chromosome Fvb5-1:8392754..8392813+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:12226260..12226330- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:2791250..2791314- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:5160362..5160362. Fragaria vesca Whole Genome v1.1 Assembly & Annotation