AX-89869836, AX-89869836 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869836
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88821608
TypeSNP
SNP AllelesT/G
Probe 1AX-89869836.AX-89869836: TAGGCAAATAACTCTCGTTGATGCCTCAGG
5' Flanking SequenceACCAATCAAGAACTCCCACCTCAAACTGCCTCGAA
3' Flanking SequenceGGACTCCGTAGTTGCTCTCAATAAACGGATCGCCG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869836 ID=AX-89869836; Name=AX-89869836; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACCAATCAAGAACTCCCACCTCAAACTGCCTCGAAKGGACTCCGTAGTTG
CTCTCAATAAACGGATCGCCG
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:9042424..9042494+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:16289590..16289660+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:10383074..10383144+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:13097571..13097641- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:12214254..12214324- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:5164696..5164696. Fragaria vesca Whole Genome v1.1 Assembly & Annotation