AX-89809150, AX-89809150 (genetic_marker) Fragaria iinumae

Marker Overview
NameAX-89809150
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809402
TypeSNP
SNP AllelesA/G
Probe 1AX-89809150.AX-89809150: TTCGACAAATGGTTATCACCATTTTTTTAC
5' Flanking SequenceTCATCAAGCTGTTTACCAATAGTGGTAAAAAAATG
3' Flanking SequenceCATATGGCCTCCACGTTTTCCTCAGCAGGACAAAT
SpeciesFragaria iinumae
Publication[view all]
ContactNahla Bassil
CommentF1D (SNP in F. iinumae F1D population)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-Fii1N/A2.42AX-89809150View
Sequence
>AX-89809150 ID=AX-89809150; Name=AX-89809150; organism=Fragaria iinumae; type=genetic_marker; length=71bp
TCATCAAGCTGTTTACCAATAGTGGTAAAAAAATGRCATATGGCCTCCAC
GTTTTCCTCAGCAGGACAAAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:363140..363210- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-3 chromosome Fvb1-3:560361..560431+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4947388..4947458+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27171522..27171592+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:453774..453844- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:379204..379204. Fragaria vesca Whole Genome v1.1 Assembly & Annotation