AX-89865173, AX-89865173 (genetic_marker) Fragaria iinumae

Marker Overview
NameAX-89865173
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809694
TypeSNP
SNP AllelesT/G
Probe 1AX-89865173.AX-89865173: TGCTATTGGTTTGCGAAACAAACTCATCAC
5' Flanking SequenceTATCTTGCAGGGTTGTCTTCCCTCCCTTGTTAGTA
3' Flanking SequenceCACTACTCAAACAAAGCGTTTGGTTATCGTTGGAT
SpeciesFragaria iinumae
Publication[view all]
ContactNahla Bassil
CommentF1D (SNP in F. iinumae F1D population)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-Fii1N/A0AX-89865173View
Sequence
>AX-89865173 ID=AX-89865173; Name=AX-89865173; organism=Fragaria iinumae; type=genetic_marker; length=71bp
TATCTTGCAGGGTTGTCTTCCCTCCCTTGTTAGTAKCACTACTCAAACAA
AGCGTTTGGTTATCGTTGGAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:69161..69231- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-3 chromosome Fvb1-3:327203..327273+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27522270..27522340+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:5196094..5196164- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:673183..673183. Fragaria vesca Whole Genome v1.1 Assembly & Annotation