AX-89861891, AX-89861891 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89861891
Genbank IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88872538
TypeIndel
Probe 1AX-89861891.AX-89861891: TACGGGTTAGTTTTTACGTTCATGACATTA
5' Flanking SequenceCTGTCTTTGGTGCTGGGAGGTGACCCCTTATTTTC
3' Flanking SequenceATTACAGTACTTGCATTTTTGATTGGGCATGTTGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A4.22AX-89861891View
Sequence
>AX-89861891 ID=AX-89861891; Name=AX-89861891; organism=Fragaria x ananassa; type=genetic_marker; length=77bp
CTGTCTTTGGTGCTGGGAGGTGACCCCTTATTTTC[-/ATT]ATTACAGT
ACTTGCATTTTTGATTGGGCATGTTGT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:127766..127838+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:27147491..27147563+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:35516327..35516399+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:127800..127800. Fragaria vesca Whole Genome v1.1 Assembly & Annotation