AX-89899609, AX-89899609 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89899609
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88872491
TypeSNP
SNP AllelesT/C
Probe 1AX-89899609.AX-89899609: GAAAGTCCCGGAATACTGTTTCTTCCACGA
5' Flanking SequenceGTCAGTACCTCCAGCACCGGCTGTAATAGAAATAA
3' Flanking SequenceAGCACCTTCTTTGTCATAAGGCCCTGAAAGAAGTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A4.22AX-89899609View
Sequence
>AX-89899609 ID=AX-89899609; Name=AX-89899609; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTCAGTACCTCCAGCACCGGCTGTAATAGAAATAAYAGCACCTTCTTTGT
CATAAGGCCCTGAAAGAAGTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:65060..65130+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:27062127..27062197+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:35461256..35461326+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:2493411..2493480- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:65095..65095. Fragaria vesca Whole Genome v1.1 Assembly & Annotation