AX-89799565, AX-89799565 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799565
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88872492
TypeSNP
SNP AllelesA/G
Probe 1AX-89799565.AX-89799565: GCTAAAATAAGCCAGAAACTGTAGTCACTC
5' Flanking SequenceTTAAGCGATTTTATTCGGTCTTTGACATCAGTGAG
3' Flanking SequenceGCCAAAAGGTTCTCTTGAGCTAAAGCACGATCATC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A4.22AX-89799565View
Sequence
>AX-89799565 ID=AX-89799565; Name=AX-89799565; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTAAGCGATTTTATTCGGTCTTTGACATCAGTGAGRGCCAAAAGGTTCTC
TTGAGCTAAAGCACGATCATC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:65934..66004+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:27063003..27063073+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:35462131..35462201+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:2492540..2492610- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:65969..65969. Fragaria vesca Whole Genome v1.1 Assembly & Annotation