AX-89899845, AX-89899845 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89899845
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88872918
TypeSNP
SNP AllelesT/C
Probe 1AX-89899845.AX-89899845: ATCCACGGACTTGGTGAAAGTACCGAGAGT
5' Flanking SequenceTGATGTTGTTTGTGAGGACGAGGATAGTGGGGTAA
3' Flanking SequenceTGAGAGCCATGAAAGTGGTTCAGGCACCTATGAGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A4.22AX-89899845View
Sequence
>AX-89899845 ID=AX-89899845; Name=AX-89899845; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGATGTTGTTTGTGAGGACGAGGATAGTGGGGTAAYTGAGAGCCATGAAA
GTGGTTCAGGCACCTATGAGA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:1002820..1002890- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:42102554..42102624+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:26326335..26326405+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:35157428..35157498+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:3104341..3104411- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:39728926..39728996- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:36306474..36306544- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:759662..759662. Fragaria vesca Whole Genome v1.1 Assembly & Annotation