AX-89900130, AX-89900130 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89900130
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88872995
TypeSNP
SNP AllelesT/C
Probe 1AX-89900130.AX-89900130: GAAGTCTTTTGGTTTTTGTACTTTGTTCTG
5' Flanking SequenceATTTGGTTTCTCATGAGAACAGTTGCGTACGGATA
3' Flanking SequenceGTCTTGTTTCATGTTTTTGGTTTTCTGAAGAGAGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A4.22AX-89900130View
Sequence
>AX-89900130 ID=AX-89900130; Name=AX-89900130; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTTGGTTTCTCATGAGAACAGTTGCGTACGGATAYGTCTTGTTTCATGT
TTTTGGTTTTCTGAAGAGAGA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:871913..871983- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:26445085..26445155+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:35260909..35260979+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:3022340..3022410- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:36195688..36195758- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:890569..890569. Fragaria vesca Whole Genome v1.1 Assembly & Annotation