AX-89842898, AX-89842898 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89842898
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88872996
TypeSNP
SNP AllelesA/G
Probe 1AX-89842898.AX-89842898: GTATAAGGTCCCTCAAGATTAACACCCACT
5' Flanking SequenceTATTTCATATTCCAGGGAGTTCTAATTGTGGGTGA
3' Flanking SequenceAGGGGAACAGGAAAGACATCTCTAGCACTGGCTAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A4.22AX-89842898View
Sequence
>AX-89842898 ID=AX-89842898; Name=AX-89842898; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TATTTCATATTCCAGGGAGTTCTAATTGTGGGTGARAGGGGAACAGGAAA
GACATCTCTAGCACTGGCTAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:870777..870847- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:26446226..26446296+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:35262045..35262115+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:3021220..3021290- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:36194552..36194622- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:891705..891705. Fragaria vesca Whole Genome v1.1 Assembly & Annotation