AX-89850775, AX-89850775 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850775
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88892499
TypeSNP
SNP AllelesT/G
Probe 1AX-89850775.AX-89850775: CCACCAGCGAGTAAAGAAATGGCCGTTTTG
5' Flanking SequenceGTGGTGGTGGTCGCTCATTTCTTTACCGGCAAAAC
3' Flanking SequenceTTTCTTTTTTGGTTGGGGGGTTTCTGTTTGTTTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:12570463..12570533 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:7679098..7679171 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4chromosomeFvb4:17787800..17787866 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7-3chromosomeFvb7-3:21194542..21194612 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-3chromosomeFvb7-3:17413045..17413128 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:28329302..28329378 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-4chromosomeFvb5-4:16295108..16295178 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-1chromosomeFvb1-1:21566778..21566861 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:18429152..18429222 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:7565276..7565349 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-3chromosomeFvb6-3:32110851..32110921 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-3chromosomeFvb6-3:10552658..10552728 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-1chromosomeFvb5-1:17643578..17643658 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-2chromosomeFvb4-2:17719063..17719132 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb3-1chromosomeFvb3-1:30775758..30775841 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb3-1chromosomeFvb3-1:24503443..24503512 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb2-3chromosomeFvb2-3:15538409..15538491 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-2chromosomeFvb1-2:28372534..28372604 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG7chromosomeLG7:2923192..2923192 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89850775 ID=AX-89850775; Name=AX-89850775; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTGGTGGTGGTCGCTCATTTCTTTACCGGCAAAACKTTTCTTTTTTGGTT
GGGGGGTTTCTGTTTGTTTTT