AX-89906847, AX-89906847 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906847
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88892837
TypeSNP
SNP AllelesA/T
Probe 1AX-89906847.AX-89906847_probe1: ATTCTAAACTCTTAGAGGAAGTTGGTTTTA
Probe 2AX-89906847.AX-89811663_probe2: ATTCTAAACTCTTAGAGGAAGTTGGTTTTT
5' Flanking SequenceGTCTTTTAGCAGCATGGATCTATGGTTTTTAAAAA
3' Flanking SequenceTTTTGGTTGAAGGAGATTCTCAAATCTTAATCAAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906847 ID=AX-89906847; Name=AX-89906847; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTCTTTTAGCAGCATGGATCTATGGTTTTTAAAAAWTTTTGGTTGAAGGA
GATTCTCAAATCTTAATCAAT
Alignments
Feature NameTypeLocationAnalysis
Fvb4 chromosome Fvb4:17245764..17245834+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:17457780..17457850+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:8671360..8671430+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:11726296..11726366- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:1774196..1774266- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:28575123..28575193- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:14156269..14156339- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:13330081..13330151- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:6854890..6854960- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:3490227..3490297+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:5422994..5423064+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:15225749..15225819+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:15204992..15205062+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-3 chromosome Fvb4-3:28197422..28197492+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-1 chromosome Fvb4-1:9282442..9282512+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:21220833..21220903- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:22545954..22545985- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:11229941..11230011- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:17674954..17675024- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:15442325..15442395- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:17695800..17695870- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:24617996..24618065- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:19887118..19887188- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:10928757..10928827- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:14489613..14490131- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:18222392..18222462- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:3767359..3767359. Fragaria vesca Whole Genome v1.1 Assembly & Annotation