AX-89850816, AX-89850816 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850816
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88893002
TypeSNP
SNP AllelesT/C
Probe 1AX-89850816.AX-89850816: TAATAGTTGAAGAAATAGAGGAAGAAGACA
5' Flanking SequenceTTTTTATTATCAACTTCTTTATCTCCTTCTTCTGT
3' Flanking SequenceCAGAAAGGTCATTTCTACTTAACCACAAATCTATG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850816 ID=AX-89850816; Name=AX-89850816; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTTTTATTATCAACTTCTTTATCTCCTTCTTCTGTYCAGAAAGGTCATTT
CTACTTAACCACAAATCTATG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:11355218..11355288- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3-1 chromosome Fvb3-1:3362681..3363069+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:10930178..10930249- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:16471866..16471935- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:11836294..11836363- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:26405955..26406026- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:4138437..4138437. Fragaria vesca Whole Genome v1.1 Assembly & Annotation