AX-89906899, AX-89906899 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906899
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88894006
TypeSNP
SNP AllelesA/T
Probe 1AX-89906899.AX-89906899_probe1: TACAGAGTACAGTCCGTTTCTCCGCCTCCA
Probe 2AX-89906899.AX-89811840_probe2: TACAGAGTACAGTCCGTTTCTCCGCCTCCT
5' Flanking SequenceATGTCGTTGTTGACGTCACAACCCTCCATTCTGAA
3' Flanking SequenceCCTCCGCCTCTTTGCCTGACATGAGACATGGAATC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906899 ID=AX-89906899; Name=AX-89906899; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGTCGTTGTTGACGTCACAACCCTCCATTCTGAAWCCTCCGCCTCTTTG
CCTGACATGAGACATGGAATC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:2171906..2171976+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:5380968..5381038+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:17894145..17894215- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:6174065..6174135- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:37196213..37196283- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:4524674..4524744- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:1754798..1754868- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:3600504..3600574- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:13734296..13734366- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:27308955..27309025- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:19593659..19593729- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3-3 chromosome Fvb3-3:16973220..16973286- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:6600710..6600710. Fragaria vesca Whole Genome v1.1 Assembly & Annotation