AX-89906902, AX-89906902 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906902
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88894047
35K SNP array for cultivated strawberry:Affx-88894047
TypeSNP
SNP AllelesA/G
Probe 1AX-89906902.AX-89906902: GAGTGCATGACAAAGCAGTAGAAGTAACTG
5' Flanking SequenceACATTTGATATAGAATGAGCCGTACCTGCGACCTC
3' Flanking SequenceGTCAATGAAGATGACGAAACAGTACGTGAGGGGAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
S Verma
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
S Verma
First name:S
Last name:Verma
Institution:University of Florida
Country:United States
Last update:2017
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Sequence
>AX-89906902 ID=AX-89906902; Name=AX-89906902; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACATTTGATATAGAATGAGCCGTACCTGCGACCTCRGTCAATGAAGATGA
CGAAACAGTACGTGAGGGGAA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:2268253..2268323+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:25131203..25131272+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:19766547..19766616+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
LG7 chromosome LG7:6697057..6697057. Fragaria vesca Whole Genome v1.1 Assembly & Annotation