AX-89906912, AX-89906912 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906912
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88894322
TypeSNP
SNP AllelesT/C
Probe 1AX-89906912.AX-89906912: TGACATTAAATTATTAAAGACTGAAATCTC
5' Flanking SequenceGAGGGAATCTACCTAAGTTAAAAAGCTAGGGTTTA
3' Flanking SequenceCTCTAAAGTCAGAAATTATTAAATTACAGTATCAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906912 ID=AX-89906912; Name=AX-89906912; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GAGGGAATCTACCTAAGTTAAAAAGCTAGGGTTTAYCTCTAAAGTCAGAA
ATTATTAAATTACAGTATCAG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:2958010..2958080+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:15420733..15420942+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:12481321..12481532- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:6958855..6958925- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:32769017..32769087- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-3 chromosome Fvb1-3:25986273..25986623+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:2381562..2381631- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-2 chromosome Fvb4-2:19119819..19119888- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:14517465..14517535- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:10511608..10511678- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:24232031..24232103- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:7386814..7386814. Fragaria vesca Whole Genome v1.1 Assembly & Annotation