AX-89850919, AX-89850919 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850919
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88894806
TypeSNP
SNP AllelesC/G
Probe 1AX-89850919.AX-89850919_probe1: AGCTCCCTAATTCCCGTGATCCCACGTTTC
Probe 2AX-89850919.AX-89811962_probe2: AGCTCCCTAATTCCCGTGATCCCACGTTTG
5' Flanking SequenceAAAGATTCGAGGGATTAAGGGCACTAGGGTGCAAA
3' Flanking SequenceAATGAAGGGAAAAGTTCGAATATGACAATTCTAGG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850919 ID=AX-89850919; Name=AX-89850919; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AAAGATTCGAGGGATTAAGGGCACTAGGGTGCAAASAATGAAGGGAAAAG
TTCGAATATGACAATTCTAGG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:3894662..3894732+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:15463027..15463097+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:28933212..28933282+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:20643633..20643692+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:21828046..21828116+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:23218096..23218155+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:12883141..12883200- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:19071145..19071215- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:28031432..28031502- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:30014627..30014690- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:3596615..3596685+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:9049270..9049329+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:19851941..19852000+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:19126954..19127013- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:4472230..4472300- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:29461119..29461189- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:11808302..11808361- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:13687362..13687432- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:4346081..4346140- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:8683700..8683759- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:8334466..8334466. Fragaria vesca Whole Genome v1.1 Assembly & Annotation