AX-89906933, AX-89906933 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906933
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88894919
TypeSNP
SNP AllelesA/T
Probe 1AX-89906933.AX-89906933_probe1: TACGTTCGACTACTCCTACAACCTTTCTAA
Probe 2AX-89906933.AX-89872445_probe2: TACGTTCGACTACTCCTACAACCTTTCTAT
5' Flanking SequenceAGCAACTCACAAACTAAAACGGGCACTGCCAATGC
3' Flanking SequenceATCTTTCCAACATCCTCATCAGCTTGCATAATTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906933 ID=AX-89906933; Name=AX-89906933; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGCAACTCACAAACTAAAACGGGCACTGCCAATGCWATCTTTCCAACATC
CTCATCAGCTTGCATAATTTT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:4288116..4288186+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-3 chromosome Fvb7-3:20390827..20390897+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:3933061..3933131+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:3755431..3755501+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:18705030..18705100- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:8727920..8727920. Fragaria vesca Whole Genome v1.1 Assembly & Annotation