AX-89906942, AX-89906942 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906942
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88895046
TypeSNP
SNP AllelesA/T
Probe 1AX-89906942.AX-89906942_probe1: GTATCTCCTTAGGATATTCGCCCCAGGGTA
Probe 2AX-89906942.AX-89867410_probe2: GTATCTCCTTAGGATATTCGCCCCAGGGTT
5' Flanking SequenceTGCGCAGACAGGTGATCCCATTCTATTCTTACCAA
3' Flanking SequenceTGGGACCCCGCTTATAGGATTCCTCTATGAACAGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906942 ID=AX-89906942; Name=AX-89906942; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGCGCAGACAGGTGATCCCATTCTATTCTTACCAAWTGGGACCCCGCTTA
TAGGATTCCTCTATGAACAGT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:6410362..6410432+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:6123051..6123121+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:16492101..16492171- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:6514931..6515001- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:9065174..9065174. Fragaria vesca Whole Genome v1.1 Assembly & Annotation