AX-89906575, AX-89906575 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906575
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88895641
TypeSNP
SNP AllelesA/G
Probe 1AX-89906575.AX-89906575: CGAACCGGGAACTAACGGTCAGAGTTGGCC
5' Flanking SequenceATGGGCAATTGAACTGGTGGAATTTGATATCCATT
3' Flanking SequenceCCGGTTGAGACTGGCAATCAAGGGCCAAGCAGCGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Sequence
>AX-89906575 ID=AX-89906575; Name=AX-89906575; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGGGCAATTGAACTGGTGGAATTTGATATCCATTRCCGGTTGAGACTGG
CAATCAAGGGCCAAGCAGCGA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:8749529..8749599+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:330789..330840+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:17500837..17500906+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:10338589..10338640- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:17015842..17015906- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:21098994..21099063- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:18454056..18454126- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:19507935..19507989- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:20221403..20221472- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
LG7 chromosome LG7:10168324..10168324. Fragaria vesca Whole Genome v1.1 Assembly & Annotation