AX-89850388, AX-89850388 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850388
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88895664
TypeSNP
SNP AllelesT/G
Probe 1AX-89850388.AX-89850388: GACACAATTAACAACGTCAGGAATTTAGTA
5' Flanking SequenceAGATTCTGTGTTAATTGTTGCAGTCCTTAAATCAT
3' Flanking SequenceGCCATATATATGTTATAAGCTCAAGGAAATTTAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850388 ID=AX-89850388; Name=AX-89850388; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGATTCTGTGTTAATTGTTGCAGTCCTTAAATCATKGCCATATATATGTT
ATAAGCTCAAGGAAATTTAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:8805745..8805815+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-3 chromosome Fvb7-3:14270247..14270317+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:15751495..15751565- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:9510002..9510072- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:14759233..14759297- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:10167039..10167103- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:10224540..10224540. Fragaria vesca Whole Genome v1.1 Assembly & Annotation