AX-89906580, AX-89906580 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906580
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88895755
TypeSNP
SNP AllelesA/T
Probe 1AX-89906580.AX-89906580_probe1: TGTCCCGGGTCTTAAGACTTGTACTTTTTA
Probe 2AX-89906580.AX-89857604_probe2: TGTCCCGGGTCTTAAGACTTGTACTTTTTT
5' Flanking SequenceTTGGTATTGGAGAATAAGTAAGATGTAAAAGGGAA
3' Flanking SequenceTTTTTCATGTTCAGAATTCTGGGCCCTGTATTTGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906580 ID=AX-89906580; Name=AX-89906580; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTGGTATTGGAGAATAAGTAAGATGTAAAAGGGAAWTTTTTCATGTTCAG
AATTCTGGGCCCTGTATTTGA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:9088295..9088365+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:14055170..14055238+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:14582121..14582190+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:15445182..15445252- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:9254391..9254461- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:10507090..10507090. Fragaria vesca Whole Genome v1.1 Assembly & Annotation