AX-89906591, AX-89906591 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906591
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896042
TypeSNP
SNP AllelesA/T
Probe 1AX-89906591.AX-89906591_probe1: AATCGTAGACTACTCGGTAACTCCCCACGA
Probe 2AX-89906591.AX-89911873_probe2: AATCGTAGACTACTCGGTAACTCCCCACGT
5' Flanking SequenceTTATGAATATTAGGAGAAGGTCAAATGCGCAGACC
3' Flanking SequenceGCACCCCTCAATGGCTCATCAGATGCTAACAAATC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906591 ID=AX-89906591; Name=AX-89906591; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTATGAATATTAGGAGAAGGTCAAATGCGCAGACCWGCACCCCTCAATGG
CTCATCAGATGCTAACAAATC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:9666393..9666463+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-3 chromosome Fvb7-3:15225055..15225125+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:14735146..14735216- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:8507398..8507468- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:13666041..13666111- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:9167531..9167601- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:11085188..11085188. Fragaria vesca Whole Genome v1.1 Assembly & Annotation