AX-89906607, AX-89906607 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906607
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896498
TypeSNP
SNP AllelesC/G
Probe 1AX-89906607.AX-89906607_probe1: TTTGTGTCTTTTTGGACTACATCCTCGCGC
Probe 2AX-89906607.AX-89807993_probe2: TTTGTGTCTTTTTGGACTACATCCTCGCGG
5' Flanking SequenceAGAACCATTTGAAGCAGCGAACCGGCGACATGGAC
3' Flanking SequenceGCGCTCCTACATCAGGTTTTTCTGTGTTTTTAAGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906607 ID=AX-89906607; Name=AX-89906607; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGAACCATTTGAAGCAGCGAACCGGCGACATGGACSGCGCTCCTACATCA
GGTTTTTCTGTGTTTTTAAGT
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:18483944..18484015+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:18497960..18498021+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:5471899..5471969- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:19112072..19112142- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:3182498..3182568- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:17632781..17632851+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:20737925..20737996+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:20866066..20866130+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:25916330..25916400+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:9887628..9887698- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:16057782..16057852- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:858523..858593- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:12024987..12024987. Fragaria vesca Whole Genome v1.1 Assembly & Annotation