AX-89850447, AX-89850447 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850447
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896537
TypeSNP
SNP AllelesC/G
Probe 1AX-89850447.AX-89850447_probe1: AGACGTGTCATTACCTCAAACTAAAAGAAC
Probe 2AX-89850447.AX-89913905_probe2: AGACGTGTCATTACCTCAAACTAAAAGAAG
5' Flanking SequenceAAAAAATCTGCACAGTAATGGAGTTTGATTTTCTT
3' Flanking SequenceTCTTTTTATTTTTCTTTTTTGTGTTGCTGAAAATG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850447 ID=AX-89850447; Name=AX-89850447; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AAAAAATCTGCACAGTAATGGAGTTTGATTTTCTTSTCTTTTTATTTTTC
TTTTTTGTGTTGCTGAAAATG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:5342407..5342477- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:5002866..5002936+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:5386862..5386932+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:17794224..17794294- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:18856037..18856107- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:12154479..12154479. Fragaria vesca Whole Genome v1.1 Assembly & Annotation