AX-89850471, AX-89850471 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850471
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896892
TypeSNP
SNP AllelesA/G
Probe 1AX-89850471.AX-89850471: GTTAGAAGGGTTCGAAGTTGTTCCAGTAGA
5' Flanking SequenceCTTCTCAATCTTCCCAAGCTTCAACAAGGTCATCT
3' Flanking SequenceTGAGGAACAAGGGAAGTGCAAGGAATACTAGAAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Sequence
>AX-89850471 ID=AX-89850471; Name=AX-89850471; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTTCTCAATCTTCCCAAGCTTCAACAAGGTCATCTRTGAGGAACAAGGGA
AGTGCAAGGAATACTAGAAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:6789610..6789680+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:15153120..15153653+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:4607247..4607317- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
LG7 chromosome LG7:12889639..12889639. Fragaria vesca Whole Genome v1.1 Assembly & Annotation