AX-89850475, AX-89850475 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850475
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896940
TypeSNP
SNP AllelesA/G
Probe 1AX-89850475.AX-89850475: TTGGAGATAGTAAAAACCATCCTTGCGTCA
5' Flanking SequenceATCTCAACCTCTATCATTTTTGGTAGGAACGCAGT
3' Flanking SequenceCGTATATGATGCAGCACAAAAATCTATGCAAGTAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850475 ID=AX-89850475; Name=AX-89850475; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATCTCAACCTCTATCATTTTTGGTAGGAACGCAGTRCGTATATGATGCAG
CACAAAAATCTATGCAAGTAG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:4577927..4577997+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:4569140..4569209+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:4508415..4508485- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:4165714..4165784+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:4367363..4367433+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:4148867..4148937+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:3884627..3884697+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:4041843..4041913+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:4052416..4052486+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:18556523..18556593- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:19882784..19882854- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:12988471..12988471. Fragaria vesca Whole Genome v1.1 Assembly & Annotation