AX-89906627, AX-89906627 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906627
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88897015
TypeSNP
SNP AllelesA/T
Probe 1AX-89906627.AX-89906627_probe1: CCTTAAGTCTCAAGGTTAGATACCTTCTCA
Probe 2AX-89906627.AX-89913033_probe2: CCTTAAGTCTCAAGGTTAGATACCTTCTCT
5' Flanking SequenceTCTTCCGATCCCAAATTTCTAACAAATAGTAATAC
3' Flanking SequenceCTCTTCCATAGATTGGAACTCTGAATTCCAAATAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906627 ID=AX-89906627; Name=AX-89906627; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCTTCCGATCCCAAATTTCTAACAAATAGTAATACWCTCTTCCATAGATT
GGAACTCTGAATTCCAAATAG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:4410309..4410379- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:18655644..18655714+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:20013887..20013957+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:4039586..4039769- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:13086577..13086577. Fragaria vesca Whole Genome v1.1 Assembly & Annotation