AX-89906635, AX-89906635 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906635
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88897158
TypeSNP
SNP AllelesC/G
Probe 1AX-89906635.AX-89906635_probe1: ACTCTACAAAAGGAATCGTCTAAGGTTAAC
Probe 2AX-89906635.AX-89858504_probe2: ACTCTACAAAAGGAATCGTCTAAGGTTAAG
5' Flanking SequenceATGATCACTAGCAGAGGTGCAGATCATGTCAAATC
3' Flanking SequenceAATTGGAATCTGCTAAGGAAAACATCTCATGGTTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906635 ID=AX-89906635; Name=AX-89906635; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGATCACTAGCAGAGGTGCAGATCATGTCAAATCSAATTGGAATCTGCT
AAGGAAAACATCTCATGGTTG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:15020398..15020468+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:20554141..20554211+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:13949793..13949863+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:23121319..23121389+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:21015746..21015816+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:8740127..8740197- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:9150254..9150324- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:13537262..13537262. Fragaria vesca Whole Genome v1.1 Assembly & Annotation