AX-89906659, AX-89906659 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906659
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88897583
TypeSNP
SNP AllelesA/T
Probe 1AX-89906659.AX-89906659_probe1: ATTTGTAAGACATTCTAACCACTGATTTGA
Probe 2AX-89906659.AX-89855299_probe2: ATTTGTAAGACATTCTAACCACTGATTTGT
5' Flanking SequenceATGAAAGTAGTTTGAGTGGCATAGTTAGTCACCAT
3' Flanking SequenceGTTTAGTCACCAATCTTACAGAATGTTTAATGCAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906659 ID=AX-89906659; Name=AX-89906659; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGAAAGTAGTTTGAGTGGCATAGTTAGTCACCATWGTTTAGTCACCAAT
CTTACAGAATGTTTAATGCAT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:15896879..15896949+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-1 chromosome Fvb7-1:23939491..23939522+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:8040371..8040421- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:21350292..21350363- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:14413743..14413743. Fragaria vesca Whole Genome v1.1 Assembly & Annotation