AX-89850541, AX-89850541 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850541
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88898210
TypeSNP
SNP AllelesT/C
Probe 1AX-89850541.AX-89850541: TCTGCATGTAGTACGGTTTGGGACGGAGAC
5' Flanking SequenceAATGTAGACGTACATCATGCCAAACCCTGCCTCTG
3' Flanking SequenceGATCAGTTTTGCATCCAAAGCTCTAGTGCATGGAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850541 ID=AX-89850541; Name=AX-89850541; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AATGTAGACGTACATCATGCCAAACCCTGCCTCTGYGATCAGTTTTGCAT
CCAAAGCTCTAGTGCATGGAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:24586982..24587037+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:17663477..17663547- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:18844751..18844806- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:1446092..1446150- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:6209163..6209229+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:5528708..5528774+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:16971692..16971751+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:14596977..14597032+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:29001148..29001214+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:25288621..25288685+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:7758065..7758123+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:23095347..23095413- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:15385038..15385038. Fragaria vesca Whole Genome v1.1 Assembly & Annotation