AX-89850570, AX-89850570 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850570
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88898596
TypeSNP
SNP AllelesC/G
Probe 1AX-89850570.AX-89850570_probe1: GAACCTAAACTTAACCCAATGAGCTACATC
Probe 2AX-89850570.AX-89915113_probe2: GAACCTAAACTTAACCCAATGAGCTACATG
5' Flanking SequenceGGTGTTCTTGGATTTGAATTGGGTTACTCGATGTA
3' Flanking SequenceAATCCAAATGCATTGGTGATTTGGGAAGCTCAATT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850570 ID=AX-89850570; Name=AX-89850570; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGTGTTCTTGGATTTGAATTGGGTTACTCGATGTASAATCCAAATGCATT
GGTGATTTGGGAAGCTCAATT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:17003557..17003627+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:16995266..16995336+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:17014595..17014665- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:17050217..17050287- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:6721557..6721627+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:29554313..29554383+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:22489816..22489886+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:22480609..22480679+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:24897350..24897420+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:24892353..24892423+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:6752529..6752599- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:6757576..6757646- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:7544238..7544308- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:4750312..4750378- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:7550602..7550672- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:22500901..22500971- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:29580987..29581057- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:29589270..29589340- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:16033920..16033920. Fragaria vesca Whole Genome v1.1 Assembly & Annotation