AX-89906696, AX-89906696 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906696
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88898748
TypeSNP
SNP AllelesA/G
Probe 1AX-89906696.AX-89906696: CTCTTCAACCAAGAACTTCCAACAAGTTTA
5' Flanking SequenceCTTGAGAAATGCAATGGATGGATGAATCTTAACTA
3' Flanking SequenceATTTGAACAACCTTCAAGAACCAACTTCTCAAGGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906696 ID=AX-89906696; Name=AX-89906696; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTTGAGAAATGCAATGGATGGATGAATCTTAACTARATTTGAACAACCTT
CAAGAACCAACTTCTCAAGGT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:22790322..22790392+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:22928765..22928835+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:22762355..22762425+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:11342199..11342245+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:16755803..16755873- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:16695191..16695261- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:23113096..23113166- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:23104242..23104310- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:23087598..23087666- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:522478..522548+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:528166..528236+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:29762216..29762286+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:29802032..29802102+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:29922586..29922656+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:31463547..31463617+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:22279696..22279766- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:22237493..22237562- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:29801270..29801333- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:25659198..25659268- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:16292712..16292712. Fragaria vesca Whole Genome v1.1 Assembly & Annotation