AX-89850581, AX-89850581 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850581
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88898793
TypeSNP
SNP AllelesT/C
Probe 1AX-89850581.AX-89850581: CTAAGAAACTAAAGAGATATGAAGTATATT
5' Flanking SequenceACTTTGATTCTTTGATTTCTCTATACTTCATATAA
3' Flanking SequenceGCGAGAGATAGAGAACAAAATTTTCATTGATTTTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850581 ID=AX-89850581; Name=AX-89850581; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACTTTGATTCTTTGATTTCTCTATACTTCATATAAYGCGAGAGATAGAGA
ACAAAATTTTCATTGATTTTG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:18885921..18885991+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:19498724..19498794+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:27613114..27613174+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:13697162..13697232+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:3002236..3002306- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:20818660..20818730+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:14781845..14781915+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:30446467..30446536- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:1792398..1792468- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:19328950..19329020- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:26995291..26995361- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11485619..11485689- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:15909207..15909277- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:16491447..16491447. Fragaria vesca Whole Genome v1.1 Assembly & Annotation