AX-89850598, AX-89850598 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850598
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88899043
TypeSNP
SNP AllelesT/C
Probe 1AX-89850598.AX-89850598: AGATAATCGAGGTTTCCTTTTAAACTTTTG
5' Flanking SequenceGCCAGTCTATTAGCTCCAAAGGAAAATTTGAAAAC
3' Flanking SequenceGGTTGAGGGTGATATTACATAAGGACAGTAATGCA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850598 ID=AX-89850598; Name=AX-89850598; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCCAGTCTATTAGCTCCAAAGGAAAATTTGAAAACYGGTTGAGGGTGATA
TTACATAAGGACAGTAATGCA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:18160376..18160446+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-1 chromosome Fvb7-1:25740072..25740142+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:30501103..30501173+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:6937694..6937728+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:25607868..25607938+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:4990632..4990702- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:6601423..6601493- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:682890..682960- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:27362643..27362713- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:1442050..1442120- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:18936663..18936733- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:15437736..15437806- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:17094240..17094240. Fragaria vesca Whole Genome v1.1 Assembly & Annotation