AX-89850611, AX-89850611 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850611
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88899271
TypeSNP
SNP AllelesA/T
Probe 1AX-89850611.AX-89850611_probe1: GTTAAGGAAAACGAATAAATCGAAGGTAAA
Probe 2AX-89850611.AX-89862289_probe2: GTTAAGGAAAACGAATAAATCGAAGGTAAT
5' Flanking SequenceGAACAGCAATTCCTTTTGCTTATTTAGCTTCCATT
3' Flanking SequenceTCTTTAGCCACAGACATCAAACATCTTTTTCTCGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850611 ID=AX-89850611; Name=AX-89850611; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GAACAGCAATTCCTTTTGCTTATTTAGCTTCCATTWTCTTTAGCCACAGA
CATCAAACATCTTTTTCTCGA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:18564444..18564514+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:24379069..24379103+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:4533195..4533265- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:5972849..5972919- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:17498308..17498308. Fragaria vesca Whole Genome v1.1 Assembly & Annotation