AX-89850622, AX-89850622 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850622
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88899382
TypeSNP
SNP AllelesA/G
Probe 1AX-89850622.AX-89850622: ATACTCCTTCTTCTATATTTGACACCCTTA
5' Flanking SequenceTTGCATATGAGGAAGAAGATATAAACTGTGGGAAT
3' Flanking SequenceAAGTGATAAGTGCAAGTAGTCATGTAGAAGAAAGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850622 ID=AX-89850622; Name=AX-89850622; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTGCATATGAGGAAGAAGATATAAACTGTGGGAATRAAGTGATAAGTGCA
AGTAGTCATGTAGAAGAAAGT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:18719723..18719793+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:21486200..21486274+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:24517440..24517510+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:13918758..13918832+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:9043176..9043245+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:21300696..21300769- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:4063561..4063635- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-2 chromosome Fvb4-2:9803879..9803953- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:12210390..12210464- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:21929794..21929868- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:17653587..17653587. Fragaria vesca Whole Genome v1.1 Assembly & Annotation